Logo Utrecht University

CCI – Centre for Cell Imaging

Open Source / Freeware

Links to Image analyses packages (Open source or freeware for PC):

General image viewers gen viewers
XnView Viewing/search/contact sheet freeware
Irfanview Viewing/search/contact sheet freeware
GIMP Viewing/search/adjustments open source
Company restricted company sw
LAS-AF lite Viewer/convert/basic img correction Leica
Zen  Viewer/convert/basic img correction  Zeiss
AXIOVISION LE   Viewer  Zeiss
NIS-Elements Viewer  Viewer/convert/ basic correct NIKON
Open Source Communities open source
Cell profiler  Scripting, good in batch analyses
Cell Analyst Trainable feature analyses
ImageJ  Flexible Image processing
BioimageXD Viewer/image analysis
ICY Viewer/ Image Analysis
IJ plugin assemblies ij
FIJI Assembled IJ package / automated updating
MBF Assembled IJ package (also other plugs than FIJI)
IJ-site NIH
ObjectJ University of Amsterdam (UvA)
GDSC University of Sussex
Microscopy database for image browsing OME
OME Image browsing/analyses
Bisque Image browsing/analyses
Volume viewers vol viewers
Bioview3D    3D rendering/animation
Volview Kitware       3D rendering/animation
Fluorender   3D rendering/animation